Welcome to the Gegenees project

Gegenees is a software project for comparative analysis of whole genome sequence data and other Next Generation Sequence (NGS) data. The software can e.g. compare a large number of microbial genomes, give phylogenomic overviews and define genomic signatures unique for specified target groups.

An updated version of the fragmented aligner part of Gegenees is being beta tested. To participate, please go to www.gegenees.org/beta

Plot average similarity of hundreds of genomes. Enlarge

This work was supported by:

The Swedish Civil Contingencies Agency (MSB).
European Union funded Integrated Project BIOTRACER [contract 036272] under the 6th RTD Framework
EU-project AniBioThreat [Grant Agreement: Home/2009/ISEC/AG/191] with the financial support from the Prevention of and Fight against Crime Programme of the European Union, European Commission – Directorate General Home Affairs